Fingerprint Fingerprint is based on mining the text of the persons scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 3 Similar Profiles
Molecular Dynamics Simulation Medicine & Life Sciences
Proteins Medicine & Life Sciences
proteins Physics & Astronomy
Nerve Crush Chemical Compounds
Binding Sites Medicine & Life Sciences
simulation Physics & Astronomy
Mutation Medicine & Life Sciences
Anthralin Chemical Compounds

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Grants 2015 2018

Research Output 2002 2017

  • 2923 Citations
  • 26 Scopus h-Index
  • 34 Article
  • 3 Review article
  • 1 Chapter
  • 1 Comment/debate
1 Citations

COFACTOR: Improved protein function prediction by combining structure, sequence and protein-protein interaction information

Zhang, C., Freddolino, P. L. & Zhang, Y. Jul 3 2017 In : Nucleic Acids Research. 45, W1, p. W291-W299

Research output: Contribution to journalArticle

Proteins
Protein Interaction Maps
Gene Ontology
Sequence Alignment
Structural Models

Deficiencies in Molecular Dynamics Simulation-Based Prediction of Protein-DNA Binding Free Energy Landscapes

Khabiri, M. & Freddolino, P. L. May 25 2017 In : Journal of Physical Chemistry B. 121, 20, p. 5151-5161 11 p.

Research output: Contribution to journalArticle

deoxyribonucleic acid
DNA-Binding Proteins
Molecular Dynamics Simulation
DNA
Hemerythrin
9 Citations

QwikMD - Integrative Molecular Dynamics Toolkit for Novices and Experts

Ribeiro, J. V., Bernardi, R. C., Rudack, T., Stone, J. E., Phillips, J. C., Freddolino, P. L. & Schulten, K. May 24 2016 In : Scientific Reports. 6, 26536

Research output: Contribution to journalArticle

Molecular dynamics
Computer simulation
Supercomputers
Biomolecules
Personal computers
26 Citations

Interfacial Activation of Candida antarctica Lipase B: Combined Evidence from Experiment and Simulation

Zisis, T., Freddolino, P. L., Turunen, P., Van Teeseling, M. C. F., Rowan, A. E. & Blank, K. G. Sep 29 2015 In : Biochemistry. 54, 38, p. 5969-5979 11 p.

Research output: Contribution to journalArticle

Substrates
Lipase
Candida
Cape Verde
Edema Disease of Swine
4 Citations

Revealing the genetic basis of natural bacterial phenotypic divergence

Freddolino, P. L., Goodarzi, H. & Tavazoiea, S. Feb 2014 In : Journal of Bacteriology. 196, 4, p. 825-839 15 p.

Research output: Contribution to journalArticle

Microbial Consortia
Synthetic Biology
Genetic Association Studies
Microbial Drug Resistance
Escherichia coli