Computational Medicine and Bioinformatics

Fingerprint The fingerprint is based on mining the text of the scientific documents related to the associated persons. Based on that an index of weighted terms is created, which defines the key subjects of research unit

Genes Medicine & Life Sciences
Proteins Medicine & Life Sciences
Genome Medicine & Life Sciences
Neoplasms Medicine & Life Sciences
Proteomics Medicine & Life Sciences
Population Medicine & Life Sciences
Single Nucleotide Polymorphism Medicine & Life Sciences
Therapeutics Medicine & Life Sciences

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Grants 1990 2024

Research Output 1966 2018

Segmentation of vessels in angiograms using convolutional neural networks

Nasr-Esfahani, E., Karimi, N., Jafari, M. H., Soroushmehr, S. M. R., Samavi, S., Nallamothu, B. K. & Najarian, K. Feb 1 2018 In : Biomedical Signal Processing and Control. 40, p. 240-251 12 p.

Research output: Research - peer-reviewArticle

Neural networks
Coronary Artery Disease
Image Enhancement

Abnormality detection of mammograms by discriminative dictionary learning on DSIFT descriptors

Tavakoli, N., Karimi, M., Nejati, M., Karimi, N., Soroushmehr, S. M. R., Samavi, S. & Najarian, K. Sep 13 2017 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Smarter Technology for a Healthier World, EMBC 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1740-1743 4 p. 8037179

Research output: ResearchConference contribution

Medical image processing

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

Gönen, M. , Weir, B. A. , Cowley, G. S. , Vazquez, F. , Guan, Y. , Jaiswal, A. , Karasuyama, M. , Uzunangelov, V. , Wang, T. , Tsherniak, A. , Howell, S. , Marbach, D. , Hoff, B. , Norman, T. C. , Airola, A. , Bivol, A. , Bunte, K. , Carlin, D. , Chopra, S. , Deran, A. & 105 others Ellrott, K., Gopalacharyulu, P., Graim, K., Kaski, S., Khan, S. A., Newton, Y., Ng, S., Pahikkala, T., Paull, E., Sokolov, A., Tang, H., Tang, J., Wennerberg, K., Xie, Y., Zhan, X., Zhu, F., Afsari, B., Airola, A., Aittokallio, T., Bivol, A., Boehm, J. S., Bunte, K., Carlin, D., Chang, Y. C., Chen, T., Chong, Z., Chopra, S., Cowley, G. S., Deran, A., Ellrott, K., Elmarakeby, H., Fertig, E. J., Gonçalves, E., Gönen, M., Gong, P., Gopalacharyulu, P., Graim, K., Guan, Y., Hafemeister, C., Hahn, W. C., Heath, L., Hoff, B., Howell, S., Jaiswal, A., Karasuyama, M., Kaski, S., Kędziorski, Ł., Khan, S. A., Khemka, N., King, E. K., Lauria, M., Liu, M., Machado, D., Mamitsuka, H., Marbach, D., Margolin, A. A., Mazurkiewicz, M., Menden, M. P., Migacz, S., Newton, Y., Ng, S., Nie, Z., Norman, T. C., Pahikkala, T., Paull, E., Praveen, P., Priami, C., Rizzetto, S., Rocha, M., Root, D. E., Rudd, C., Rudnicki, W. R., Saez-Rodriguez, J., Sokolov, A., Song, L., Stolovitzky, G., Stuart, J. M., Sun, D., Szalai, B., Tang, H., Tang, J., Tsherniak, A., Uzunangelov, V., Vazquez, F., Wang, T., Wang, D., Weir, B. A., Wennerberg, K., Wu, L. Y., Xiao, G., Xie, Y., Ye, J., Ye, Y., Zhan, X., Zhou, W., Zhu, F., Aittokallio, T., Mamitsuka, H., Stuart, J. M., Boehm, J. S., Root, D. E., Xiao, G., Stolovitzky, G., Hahn, W. C. & Margolin, A. A. Nov 22 2017 In : Cell Systems. 5, 5, p. 485-497.e3

Research output: Research - peer-reviewArticle

Cell Line